Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | DN752_RS25365 | Not Available | Positive | 4018867 - 4019259 | 14836.5 |
| recombination mediator recr | DN752_RS15625 | Not Available | Negative | 4019244 - 4019864 | 22623.4 |
| atp-dependent clp protease adaptor clps | DN752_RS15630 | Not Available | Negative | 4019877 - 4020170 | 10997.4 |
| sodium:solute symporter | DN752_RS15635 | Not Available | Positive | 4020225 - 4021682 | 54853.5 |
| helix-turn-helix transcriptional regulator | DN752_RS15640 | Not Available | Negative | 4021738 - 4022169 | 16541.7 |
| mgmt family protein | DN752_RS15645 | Not Available | Negative | 4022637 - 4022975 | 12427.0 |
| mechanosensitive ion channel family protein | DN752_RS15650 | Not Available | Negative | 4022965 - 4023843 | 33205.4 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS15655 | Not Available | Positive | 4023932 - 4024612 | 24594.3 |
| head gin domain-containing protein | DN752_RS15660 | Not Available | Positive | 4024625 - 4025320 | 24520.1 |
| hypothetical protein | DN752_RS24520 | Not Available | Negative | 4025440 - 4025637 | 7216.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
