Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porp/sprf family type ix secretion system membrane protein | DN752_RS15570 | Not Available | Negative | 4000608 - 4001633 | 38378.5 |
| pkd domain-containing protein | DN752_RS15575 | Not Available | Negative | 4001630 - 4006570 | 174620.0 |
| fusc family membrane protein | DN752_RS15580 | Not Available | Positive | 4007008 - 4009155 | 81238.8 |
| gfo/idh/moca family protein | DN752_RS15585 | Not Available | Positive | 4009280 - 4010386 | 41970.2 |
| hypothetical protein | DN752_RS15590 | Not Available | Negative | 4010528 - 4011784 | 46339.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DN752_RS15595 | Not Available | Negative | 4011880 - 4013319 | 54570.2 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS15600 | Not Available | Negative | 4013340 - 4016771 | 126692.0 |
| fecr family protein | DN752_RS15605 | Not Available | Negative | 4016915 - 4017841 | 34142.7 |
| rna polymerase sigma factor | DN752_RS15610 | Not Available | Negative | 4017939 - 4018520 | 22624.3 |
| Trna-ala | Not Available | Not Available | Positive | 4018747 - 4018820 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
