Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | DN752_RS15520 | Not Available | Positive | 3986083 - 3986742 | 24272.3 |
| pkd domain-containing protein | DN752_RS15525 | Not Available | Positive | 3987114 - 3990338 | 117919.0 |
| duf7009 family protein | DN752_RS15530 | Not Available | Negative | 3990380 - 3990769 | 14797.2 |
| rubredoxin | DN752_RS15535 | Not Available | Negative | 3990779 - 3992212 | 54808.2 |
| nitrate reductase | DN752_RS15540 | Not Available | Negative | 3992413 - 3995934 | 129498.0 |
| nark family nitrate/nitrite mfs transporter | DN752_RS15545 | Not Available | Negative | 3995953 - 3997308 | 48770.4 |
| duf2461 domain-containing protein | DN752_RS15550 | Not Available | Positive | 3998159 - 3998839 | 25387.0 |
| cof-type had-iib family hydrolase | DN752_RS15555 | Not Available | Negative | 3998970 - 3999794 | 30736.7 |
| hypothetical protein | DN752_RS15560 | Not Available | Negative | 3999798 - 4000067 | 9843.2 |
| hypothetical protein | DN752_RS15565 | Not Available | Negative | 4000107 - 4000538 | 16368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
