Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4153 domain-containing protein | DN752_RS15475 | Not Available | Negative | 3970093 - 3971994 | 71960.1 |
| nitrite reductase small subunit nird | DN752_RS15480 | Not Available | Negative | 3972243 - 3972620 | 14203.0 |
| nitrite reductase large subunit nirb | DN752_RS15485 | Not Available | Negative | 3972709 - 3975204 | 91269.5 |
| uroporphyrinogen-iii c-methyltransferase | DN752_RS15490 | Not Available | Positive | 3975357 - 3976124 | 27379.3 |
| duf4221 family protein | DN752_RS15495 | Not Available | Negative | 3976415 - 3977554 | 43996.8 |
| duf4202 domain-containing protein | DN752_RS15500 | Not Available | Positive | 3978108 - 3978698 | 22883.5 |
| tonb-dependent receptor | DN752_RS25360 | Not Available | Positive | 3979436 - 3980008 | 20628.8 |
| duf1592 domain-containing protein | DN752_RS15505 | Not Available | Positive | 3980026 - 3982872 | 108676.0 |
| duf1552 domain-containing protein | DN752_RS15510 | Not Available | Positive | 3982952 - 3984304 | 50848.6 |
| gin domain-containing protein | DN752_RS15515 | Not Available | Positive | 3985169 - 3985834 | 24134.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
