Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | DN752_RS15375 | Not Available | Negative | 3948673 - 3950175 | 55724.5 |
| sodium/sugar symporter | DN752_RS15380 | Not Available | Negative | 3950211 - 3952085 | 68143.4 |
| nudix hydrolase | DN752_RS15385 | Not Available | Negative | 3952200 - 3952913 | 27843.5 |
| voc family protein | DN752_RS15390 | Not Available | Negative | 3953197 - 3953592 | 15400.0 |
| s41 family peptidase | DN752_RS15395 | Not Available | Negative | 3953704 - 3955380 | 62320.6 |
| hemerythrin domain-containing protein | DN752_RS15400 | Not Available | Positive | 3955546 - 3956304 | 29638.8 |
| holliday junction resolvase ruvx | DN752_RS15405 | Not Available | Positive | 3956305 - 3956718 | 15380.9 |
| peptide deformylase | DN752_RS15410 | Not Available | Positive | 3956715 - 3957269 | 21040.1 |
| amidohydrolase | DN752_RS15415 | Not Available | Positive | 3957385 - 3958176 | 30289.2 |
| t9ss type a sorting domain-containing protein | DN752_RS15420 | Not Available | Negative | 3958252 - 3960372 | 77664.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
