Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system phd/yefm family antitoxin | DN752_RS15325 | Not Available | Positive | 3936172 - 3936426 | 9605.59 |
| tonb-dependent receptor | DN752_RS15330 | Not Available | Positive | 3936429 - 3936704 | 11306.6 |
| recq family atp-dependent dna helicase | DN752_RS15335 | Not Available | Positive | 3936810 - 3941633 | 184522.0 |
| hypothetical protein | DN752_RS15340 | Not Available | Positive | 3941766 - 3942005 | 9034.86 |
| type ii toxin-antitoxin system rele/pare family toxin | DN752_RS15345 | Not Available | Positive | 3941987 - 3942301 | 12115.8 |
| helix-turn-helix transcriptional regulator | DN752_RS15350 | Not Available | Negative | 3942411 - 3943250 | 32245.1 |
| xylulokinase | DN752_RS15355 | Not Available | Positive | 3943575 - 3945068 | 54078.4 |
| xylose isomerase | DN752_RS15360 | Not Available | Positive | 3945217 - 3946530 | 49115.5 |
| hypothetical protein | DN752_RS15365 | Not Available | Negative | 3946863 - 3947102 | 9234.83 |
| glycoside hydrolase family 43 protein | DN752_RS15370 | Not Available | Negative | 3947327 - 3948460 | 42226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
