Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | DN752_RS01285 | Not Available | Negative | 365336 - 366109 | 28281.9 |
| dnrlre domain-containing protein | DN752_RS01290 | Not Available | Negative | 366235 - 367677 | 52342.4 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS01295 | Not Available | Negative | 367729 - 369096 | 51138.6 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS01300 | Not Available | Negative | 369108 - 372191 | 112358.0 |
| laci family dna-binding transcriptional regulator | DN752_RS01305 | Not Available | Positive | 372416 - 373450 | 38571.4 |
| type ii toxin-antitoxin system rele/pare family toxin | DN752_RS01310 | Not Available | Negative | 373679 - 374002 | 12584.2 |
| hypothetical protein | DN752_RS01315 | Not Available | Negative | 373996 - 374253 | 9662.35 |
| hypothetical protein | DN752_RS01320 | Not Available | Negative | 374301 - 374639 | 13049.0 |
| type ii toxin-antitoxin system rele/pare family toxin | DN752_RS01325 | Not Available | Negative | 374822 - 375061 | 9069.21 |
| hypothetical protein | DN752_RS01330 | Not Available | Negative | 375138 - 375386 | 9491.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
