Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is classified as a heterotroph, indicating that it obtains its energy from organic compounds. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, which is typically between 20°C and 45°C. The strain possesses a single replicon, which is a defining feature of its genetic structure. The genomic data for Echinicola strongylocentroti strain MEBiC08714 can be accessed under the accession number NZ_CP030041.1. The ecological significance of Echinicola strongylocentroti strain MEBiC08714 can be inferred from its heterotrophic lifestyle and aerobic metabolism. As a heterotroph, this bacterium likely plays a crucial role in the decomposition of organic matter within its environment, thus contributing to nutrient cycling. Its ability to thrive in a mesophilic temperature range suggests that it may be well-adapted to temperate ecosystems, where it could interact with various organic substrates and other microbial communities. This interaction highlights the importance of Echinicola strongylocentroti in maintaining the balance of microbial ecosystems and facilitating the breakdown of complex organic materials.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
Strainstrain MEBiC08714

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714 chromosome,

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent isocitrate dehydrogenaseDN752_RS15185Not AvailablePositive3897746 - 389998981443.1
duf1080 domain-containing proteinDN752_RS15190Not AvailableNegative3900128 - 390088628589.3
c-type cytochromeDN752_RS15195Not AvailableNegative3900941 - 390136615315.3
sugar phosphate isomerase/epimerase family proteinDN752_RS15200Not AvailableNegative3901495 - 390255039373.5
gfo/idh/moca family proteinDN752_RS15205Not AvailableNegative3902734 - 390390042983.0
nucleoside permeaseDN752_RS15210Not AvailablePositive3904210 - 390544245445.5
hydroxypyruvate isomerase family proteinDN752_RS15215Not AvailablePositive3905455 - 390632132320.6
tonb-dependent receptorDN752_RS15220Not AvailablePositive3906361 - 390803961441.9
gluconate 2-dehydrogenase subunit 3 family proteinDN752_RS15225Not AvailablePositive3908058 - 390860920257.2
sugar phosphate isomerase/epimerase family proteinDN752_RS15230Not AvailablePositive3908675 - 390958333746.8

Displaying genes 3061 – 3070 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.