Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | DN752_RS15185 | Not Available | Positive | 3897746 - 3899989 | 81443.1 |
| duf1080 domain-containing protein | DN752_RS15190 | Not Available | Negative | 3900128 - 3900886 | 28589.3 |
| c-type cytochrome | DN752_RS15195 | Not Available | Negative | 3900941 - 3901366 | 15315.3 |
| sugar phosphate isomerase/epimerase family protein | DN752_RS15200 | Not Available | Negative | 3901495 - 3902550 | 39373.5 |
| gfo/idh/moca family protein | DN752_RS15205 | Not Available | Negative | 3902734 - 3903900 | 42983.0 |
| nucleoside permease | DN752_RS15210 | Not Available | Positive | 3904210 - 3905442 | 45445.5 |
| hydroxypyruvate isomerase family protein | DN752_RS15215 | Not Available | Positive | 3905455 - 3906321 | 32320.6 |
| tonb-dependent receptor | DN752_RS15220 | Not Available | Positive | 3906361 - 3908039 | 61441.9 |
| gluconate 2-dehydrogenase subunit 3 family protein | DN752_RS15225 | Not Available | Positive | 3908058 - 3908609 | 20257.2 |
| sugar phosphate isomerase/epimerase family protein | DN752_RS15230 | Not Available | Positive | 3908675 - 3909583 | 33746.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
