Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructosamine kinase family protein | DN752_RS15135 | Not Available | Negative | 3889472 - 3890344 | 33062.8 |
| low molecular weight protein-tyrosine-phosphatase | DN752_RS15140 | Not Available | Negative | 3890337 - 3890822 | 18513.0 |
| duf6588 family protein | DN752_RS15145 | Not Available | Negative | 3890825 - 3891814 | 35691.6 |
| fur family transcriptional regulator | DN752_RS15150 | Not Available | Positive | 3891965 - 3892378 | 16106.0 |
| peroxiredoxin | DN752_RS15155 | Not Available | Positive | 3892433 - 3893062 | 23175.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | DN752_RS15160 | Not Available | Positive | 3893435 - 3894700 | 47443.1 |
| ribosome small subunit-dependent gtpase a | DN752_RS15165 | Not Available | Positive | 3894679 - 3895608 | 35070.0 |
| hypothetical protein | DN752_RS15170 | Not Available | Positive | 3895640 - 3895942 | 11373.9 |
| phosphoribosyltransferase family protein | DN752_RS15175 | Not Available | Positive | 3895981 - 3896484 | 18883.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DN752_RS15180 | Not Available | Positive | 3896573 - 3897394 | 29484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
