Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase c-terminal domain-containing protein | DN752_RS14985 | Not Available | Positive | 3854455 - 3855798 | 50007.8 |
| trna1(val) (adenine(37)-n6)-methyltransferase | DN752_RS14990 | Not Available | Negative | 3855787 - 3856506 | 27386.9 |
| ribonuclease hi | DN752_RS14995 | Not Available | Negative | 3856583 - 3857041 | 17354.8 |
| marc family protein | DN752_RS15000 | Not Available | Negative | 3857118 - 3857696 | 20765.5 |
| aminotransferase class v-fold plp-dependent enzyme | DN752_RS15005 | Not Available | Negative | 3857754 - 3858809 | 39834.6 |
| type ii 3-dehydroquinate dehydratase | DN752_RS15010 | Not Available | Negative | 3858822 - 3859241 | 15598.7 |
| site-specific tyrosine recombinase xerd | DN752_RS15015 | Not Available | Positive | 3859360 - 3860265 | 34798.5 |
| duf5007 domain-containing protein | DN752_RS15020 | Not Available | Negative | 3860356 - 3861462 | 41173.1 |
| fasciclin domain-containing protein | DN752_RS15025 | Not Available | Negative | 3861476 - 3862120 | 24536.7 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS15030 | Not Available | Negative | 3862145 - 3863683 | 57460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
