Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 3846458 - 3846531 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3846576 - 3846649 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3846797 - 3849684 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3849783 - 3849894 | Not Available |
| hypothetical protein | DN752_RS14955 | Not Available | Positive | 3850115 - 3850435 | 11904.9 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS14960 | Not Available | Positive | 3850575 - 3851330 | 27525.0 |
| m15 family metallopeptidase | DN752_RS14965 | Not Available | Positive | 3851330 - 3852106 | 29032.8 |
| thua domain-containing protein | DN752_RS14970 | Not Available | Positive | 3852139 - 3852915 | 29604.7 |
| alpha/beta hydrolase | DN752_RS14975 | Not Available | Negative | 3852920 - 3853573 | 24856.6 |
| cytidine deaminase | DN752_RS14980 | Not Available | Negative | 3853580 - 3854062 | 17815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
