Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DN752_RS14675 | Not Available | Positive | 3789392 - 3790590 | 43495.7 |
| atp-binding protein | DN752_RS14680 | Not Available | Positive | 3790607 - 3791749 | 43079.1 |
| atp-dependent zinc protease | DN752_RS14685 | Not Available | Positive | 3791746 - 3792189 | 17168.1 |
| 30s ribosomal protein s6--l-glutamate ligase | DN752_RS14690 | Not Available | Positive | 3792186 - 3793094 | 32478.9 |
| hydroxymethylbilane synthase | DN752_RS14695 | Not Available | Positive | 3793094 - 3794029 | 34384.4 |
| peptidylprolyl isomerase | DN752_RS14700 | Not Available | Positive | 3794031 - 3794873 | 31953.1 |
| sdr family oxidoreductase | DN752_RS14705 | Not Available | Positive | 3794854 - 3795786 | 34614.7 |
| alanine/glycine:cation symporter family protein | DN752_RS14710 | Not Available | Positive | 3796041 - 3797663 | 57511.8 |
| porin family protein | DN752_RS14715 | Not Available | Positive | 3797764 - 3798354 | 21527.6 |
| arac family transcriptional regulator | DN752_RS14720 | Not Available | Negative | 3798494 - 3799060 | 21322.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
