Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:sodium symporter family protein | DN752_RS14375 | Not Available | Positive | 3714763 - 3716073 | 47811.5 |
| tetratricopeptide repeat protein | DN752_RS14380 | Not Available | Negative | 3716325 - 3717569 | 47904.8 |
| transporter substrate-binding domain-containing protein | DN752_RS14385 | Not Available | Positive | 3717929 - 3718999 | 39061.2 |
| hypothetical protein | DN752_RS14390 | Not Available | Positive | 3719474 - 3720271 | 30610.1 |
| hypothetical protein | DN752_RS24955 | Not Available | Positive | 3720217 - 3720627 | 15512.9 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | DN752_RS14395 | Not Available | Positive | 3720984 - 3724232 | 123327.0 |
| glycosyl hydrolase | DN752_RS14400 | Not Available | Positive | 3724688 - 3728128 | 129241.0 |
| sialate o-acetylesterase | DN752_RS14405 | Not Available | Positive | 3728348 - 3729769 | 52481.3 |
| duf5703 domain-containing protein | DN752_RS14410 | Not Available | Positive | 3730149 - 3732485 | 89434.0 |
| glycoside hydrolase family 127 protein | DN752_RS14415 | Not Available | Positive | 3732654 - 3734693 | 76707.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
