Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-rhamnosidase | DN752_RS14330 | Not Available | Positive | 3702704 - 3704602 | 73337.2 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | DN752_RS24950 | Not Available | Positive | 3704521 - 3704892 | 13539.3 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | DN752_RS14335 | Not Available | Positive | 3704950 - 3707802 | 106917.0 |
| hypothetical protein | DN752_RS14340 | Not Available | Positive | 3707876 - 3708748 | 33019.9 |
| gfo/idh/moca family protein | DN752_RS14345 | Not Available | Positive | 3709028 - 3710059 | 37914.8 |
| duf6364 family protein | DN752_RS14350 | Not Available | Positive | 3710197 - 3710454 | 9789.93 |
| pin domain-containing protein | DN752_RS14355 | Not Available | Positive | 3710444 - 3710866 | 16179.5 |
| ribulose-bisphosphate carboxylase large subunit family protein | DN752_RS14360 | Not Available | Positive | 3711153 - 3712397 | 45018.9 |
| four-carbon acid sugar kinase family protein | DN752_RS14365 | Not Available | Positive | 3712400 - 3713791 | 49687.1 |
| aspartate/glutamate racemase family protein | DN752_RS14370 | Not Available | Positive | 3713931 - 3714593 | 23157.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
