Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mepb family protein | DN752_RS01180 | Not Available | Negative | 326719 - 327468 | 28739.1 |
| dinb family protein | DN752_RS01185 | Not Available | Negative | 327628 - 328143 | 20292.0 |
| rrf2 family transcriptional regulator | DN752_RS01190 | Not Available | Positive | 328751 - 329185 | 16182.7 |
| no-inducible flavohemoprotein | DN752_RS01195 | Not Available | Positive | 329248 - 330459 | 45140.2 |
| alpha/beta fold hydrolase | DN752_RS01200 | Not Available | Positive | 331736 - 332764 | 39715.6 |
| cysteine hydrolase family protein | DN752_RS01205 | Not Available | Positive | 332884 - 333444 | 20761.3 |
| mfs transporter | DN752_RS01210 | Not Available | Positive | 333448 - 334686 | 44818.2 |
| alginate lyase family protein | DN752_RS01215 | Not Available | Negative | 336153 - 337373 | 46781.5 |
| heparinase ii/iii family protein | DN752_RS01220 | Not Available | Negative | 337744 - 340158 | 91564.5 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | DN752_RS01230 | Not Available | Negative | 341384 - 343732 | 89962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
