Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DN752_RS14280 | Not Available | Negative | 3682961 - 3683941 | 37487.9 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS14285 | Not Available | Positive | 3684130 - 3687180 | 113145.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS14290 | Not Available | Positive | 3687197 - 3688840 | 62609.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS14295 | Not Available | Positive | 3689070 - 3692081 | 108031.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS14300 | Not Available | Positive | 3692152 - 3693648 | 56225.1 |
| right-handed parallel beta-helix repeat-containing protein | DN752_RS14305 | Not Available | Positive | 3693882 - 3695762 | 70462.0 |
| tim-barrel domain-containing protein | DN752_RS14310 | Not Available | Positive | 3695946 - 3698195 | 85101.4 |
| gfo/idh/moca family protein | DN752_RS14315 | Not Available | Positive | 3698472 - 3699569 | 41674.7 |
| phytanoyl-coa dioxygenase family protein | DN752_RS14320 | Not Available | Positive | 3699684 - 3700436 | 28855.3 |
| sodium:solute symporter | DN752_RS14325 | Not Available | Positive | 3700604 - 3702190 | 58258.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
