Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS24495 | Not Available | Positive | 3620460 - 3620741 | 10693.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS14130 | Not Available | Positive | 3621324 - 3624590 | 119545.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS14135 | Not Available | Positive | 3624611 - 3626479 | 70044.5 |
| hypothetical protein | DN752_RS14140 | Not Available | Negative | 3626546 - 3626944 | 14510.5 |
| dienelactone hydrolase family protein | DN752_RS14145 | Not Available | Negative | 3627674 - 3628561 | 32888.1 |
| polysaccharide deacetylase family protein | DN752_RS14150 | Not Available | Negative | 3628809 - 3629597 | 29801.7 |
| tonb-dependent receptor | DN752_RS24930 | Not Available | Negative | 3629689 - 3630932 | 46330.7 |
| acetylxylan esterase | DN752_RS14160 | Not Available | Negative | 3631509 - 3632810 | 48432.6 |
| glycoside hydrolase family 88 protein | DN752_RS14165 | Not Available | Negative | 3633293 - 3634417 | 43162.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | DN752_RS14170 | Not Available | Negative | 3635138 - 3638806 | 138132.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
