Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01777 family oxidoreductase | DN752_RS13975 | Not Available | Negative | 3576242 - 3577141 | 32845.0 |
| voltage-gated chloride channel family protein | DN752_RS13980 | Not Available | Positive | 3577299 - 3578597 | 46602.5 |
| gntr family transcriptional regulator | DN752_RS13985 | Not Available | Negative | 3579020 - 3580075 | 40710.2 |
| alpha/beta hydrolase | DN752_RS13990 | Not Available | Negative | 3580518 - 3581438 | 34048.4 |
| hypothetical protein | DN752_RS13995 | Not Available | Negative | 3581492 - 3581677 | 6832.73 |
| purine-cytosine permease family protein | DN752_RS14000 | Not Available | Negative | 3581690 - 3583132 | 52269.9 |
| gntr family transcriptional regulator | DN752_RS14005 | Not Available | Negative | 3583225 - 3584274 | 40397.6 |
| glycosyl hydrolase | DN752_RS14010 | Not Available | Negative | 3585131 - 3587920 | 104334.0 |
| l-rhamnose mutarotase | DN752_RS14015 | Not Available | Negative | 3587981 - 3588295 | 11946.2 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS14020 | Not Available | Positive | 3588738 - 3591908 | 115964.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
