Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch synthase | DN752_RS13585 | Not Available | Negative | 3480887 - 3481702 | 31441.6 |
| pantoate--beta-alanine ligase | DN752_RS13590 | Not Available | Positive | 3481829 - 3482686 | 31976.9 |
| aspartate 1-decarboxylase | DN752_RS13595 | Not Available | Positive | 3482717 - 3483064 | 12832.6 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | DN752_RS13600 | Not Available | Positive | 3483066 - 3484082 | 37979.4 |
| zinc metallopeptidase | DN752_RS13605 | Not Available | Positive | 3484104 - 3484796 | 25148.8 |
| trna dihydrouridine synthase dusb | DN752_RS13610 | Not Available | Negative | 3485131 - 3486132 | 37425.2 |
| cpbp family intramembrane glutamic endopeptidase | DN752_RS13615 | Not Available | Positive | 3486170 - 3487129 | 36147.6 |
| putative signal transducing protein | DN752_RS13620 | Not Available | Positive | 3487104 - 3487310 | 7738.36 |
| phosphatidate cytidylyltransferase | DN752_RS13625 | Not Available | Positive | 3487294 - 3488133 | 31138.7 |
| glu/leu/phe/val family dehydrogenase | DN752_RS13630 | Not Available | Positive | 3488208 - 3489485 | 46172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
