Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase family protein | DN752_RS13535 | Not Available | Positive | 3468319 - 3469443 | 41842.6 |
| hypothetical protein | DN752_RS24925 | Not Available | Negative | 3470246 - 3470434 | 7479.41 |
| batd family protein | DN752_RS13545 | Not Available | Positive | 3470551 - 3471999 | 55305.7 |
| chorismate synthase | DN752_RS13550 | Not Available | Positive | 3471999 - 3473081 | 39394.9 |
| dicarboxylate/amino acid:cation symporter | DN752_RS13555 | Not Available | Positive | 3473100 - 3474434 | 46916.8 |
| nifu family protein | DN752_RS13560 | Not Available | Positive | 3474588 - 3475172 | 21668.6 |
| duf3810 domain-containing protein | DN752_RS13565 | Not Available | Positive | 3475259 - 3476332 | 41283.7 |
| dmt family transporter | DN752_RS13570 | Not Available | Negative | 3476365 - 3477303 | 33298.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DN752_RS13575 | Not Available | Negative | 3477613 - 3479454 | 67982.6 |
| duf4270 domain-containing protein | DN752_RS13580 | Not Available | Negative | 3479506 - 3480963 | 53493.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
