Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tspo/mbr family protein | DN752_RS13485 | Not Available | Positive | 3458085 - 3458585 | 18931.6 |
| srpbcc family protein | DN752_RS13490 | Not Available | Positive | 3458650 - 3459117 | 17873.8 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | DN752_RS13495 | Not Available | Negative | 3459126 - 3459809 | 25993.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DN752_RS13500 | Not Available | Negative | 3459811 - 3460296 | 17799.7 |
| m16 family metallopeptidase | DN752_RS13505 | Not Available | Negative | 3460544 - 3461785 | 46922.8 |
| heavy-metal-associated domain-containing protein | DN752_RS13510 | Not Available | Negative | 3462119 - 3462319 | 6917.23 |
| heavy metal translocating p-type atpase | DN752_RS13515 | Not Available | Negative | 3463109 - 3465301 | 78259.5 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | DN752_RS13520 | Not Available | Positive | 3465523 - 3467088 | 59654.1 |
| 5-formyltetrahydrofolate cyclo-ligase | DN752_RS13525 | Not Available | Positive | 3467081 - 3467653 | 21528.3 |
| hypothetical protein | DN752_RS13530 | Not Available | Positive | 3467678 - 3468163 | 17932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
