Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-ii family nitrogen regulator | DN752_RS13435 | Not Available | Positive | 3442976 - 3443314 | 12604.5 |
| ammonium transporter | DN752_RS13440 | Not Available | Positive | 3443384 - 3444616 | 43686.6 |
| m1 family metallopeptidase | DN752_RS13445 | Not Available | Negative | 3445131 - 3447461 | 89883.9 |
| hupe/urej family protein | DN752_RS13450 | Not Available | Negative | 3447541 - 3448119 | 21269.7 |
| duf6702 family protein | DN752_RS13455 | Not Available | Positive | 3448300 - 3448788 | 18643.1 |
| aldehyde dehydrogenase family protein | DN752_RS13460 | Not Available | Negative | 3449222 - 3450631 | 52033.3 |
| gliding motility-associated c-terminal domain-containing protein | DN752_RS13465 | Not Available | Positive | 3450997 - 3453168 | 78882.5 |
| type ix secretion system membrane protein porp/sprf | DN752_RS13470 | Not Available | Positive | 3453181 - 3454158 | 36530.4 |
| ompa family protein | DN752_RS13475 | Not Available | Positive | 3454161 - 3456845 | 100920.0 |
| helix-turn-helix domain-containing protein | DN752_RS13480 | Not Available | Positive | 3457316 - 3457936 | 23214.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
