Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | DN752_RS13335 | Not Available | Negative | 3418648 - 3419421 | 28202.2 |
| superoxide dismutase | DN752_RS13340 | Not Available | Positive | 3419645 - 3420418 | 28042.8 |
| nucleoside triphosphate pyrophosphohydrolase family protein | DN752_RS13345 | Not Available | Positive | 3421500 - 3421967 | 17414.8 |
| p1 family peptidase | DN752_RS13350 | Not Available | Positive | 3422018 - 3423142 | 39251.8 |
| gluconate 2-dehydrogenase subunit 3 family protein | DN752_RS13355 | Not Available | Positive | 3423393 - 3423944 | 19785.4 |
| gmc oxidoreductase | DN752_RS13360 | Not Available | Positive | 3423965 - 3425665 | 63091.2 |
| hypothetical protein | DN752_RS13365 | Not Available | Positive | 3425761 - 3426708 | 34842.2 |
| tetr/acrr family transcriptional regulator | DN752_RS13370 | Not Available | Positive | 3426959 - 3427582 | 24421.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | DN752_RS13375 | Not Available | Negative | 3427702 - 3428541 | 31423.7 |
| dead/deah box helicase | DN752_RS13380 | Not Available | Negative | 3428588 - 3432322 | 143836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
