Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system subunit m | DN752_RS13230 | Not Available | Positive | 3395401 - 3396963 | 58472.1 |
| restriction endonuclease subunit s | DN752_RS13235 | Not Available | Positive | 3397039 - 3398250 | 46088.8 |
| hypothetical protein | DN752_RS13240 | Not Available | Positive | 3398254 - 3400131 | 74159.4 |
| fic family protein | DN752_RS13245 | Not Available | Positive | 3400144 - 3401226 | 41405.9 |
| type i restriction endonuclease subunit r | DN752_RS13250 | Not Available | Positive | 3401400 - 3404627 | 123806.0 |
| m48 family metallopeptidase | DN752_RS13255 | Not Available | Positive | 3404672 - 3405322 | 24947.9 |
| ig-like domain-containing protein | DN752_RS13260 | Not Available | Positive | 3405905 - 3406654 | 27558.1 |
| fibrobacter succinogenes major paralogous domain-containing protein | DN752_RS13270 | Not Available | Negative | 3406947 - 3407495 | 20500.1 |
| hypothetical protein | DN752_RS13275 | Not Available | Negative | 3407492 - 3408346 | 32156.8 |
| voc family protein | DN752_RS13280 | Not Available | Negative | 3408546 - 3408923 | 13765.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
