Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6520 family protein | DN752_RS13180 | Not Available | Positive | 3381640 - 3381924 | 10364.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS13185 | Not Available | Negative | 3381984 - 3383369 | 52679.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS13195 | Not Available | Negative | 3383903 - 3387076 | 117936.0 |
| tlpa family protein disulfide reductase | DN752_RS13200 | Not Available | Negative | 3387073 - 3388662 | 59485.6 |
| hypothetical protein | DN752_RS24490 | Not Available | Negative | 3389413 - 3389565 | 5919.19 |
| helix-turn-helix domain-containing protein | DN752_RS13205 | Not Available | Positive | 3389927 - 3390190 | 10208.3 |
| aaa family atpase | DN752_RS13210 | Not Available | Positive | 3390570 - 3392828 | 86813.6 |
| competence protein coia | DN752_RS13215 | Not Available | Positive | 3393117 - 3393827 | 28492.1 |
| hypothetical protein | DN752_RS13220 | Not Available | Positive | 3393905 - 3394645 | 28927.1 |
| restriction endonuclease subunit s | DN752_RS13225 | Not Available | Positive | 3394836 - 3395399 | 21357.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
