Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | DN752_RS13125 | Not Available | Positive | 3367563 - 3371891 | 160049.0 |
| efflux rnd transporter periplasmic adaptor subunit | DN752_RS13130 | Not Available | Positive | 3371895 - 3373058 | 42898.6 |
| response regulator transcription factor | DN752_RS13135 | Not Available | Positive | 3373137 - 3373802 | 25386.6 |
| sensor histidine kinase | DN752_RS13140 | Not Available | Positive | 3373802 - 3375190 | 52470.5 |
| duf4382 domain-containing protein | DN752_RS13145 | Not Available | Positive | 3375506 - 3376348 | 30128.5 |
| jab domain-containing protein | DN752_RS13150 | Not Available | Positive | 3377050 - 3377520 | 17033.4 |
| tetr/acrr family transcriptional regulator | DN752_RS13155 | Not Available | Negative | 3377546 - 3378199 | 25332.2 |
| porin family protein | DN752_RS13160 | Not Available | Positive | 3378381 - 3379094 | 26515.7 |
| hypothetical protein | DN752_RS13165 | Not Available | Positive | 3379338 - 3380279 | 35477.9 |
| maue/doxx family redox-associated membrane protein | DN752_RS13175 | Not Available | Positive | 3381023 - 3381490 | 17073.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
