Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | DN752_RS13080 | Not Available | Negative | 3359218 - 3360132 | 34258.9 |
| 2'-5' rna ligase family protein | DN752_RS13085 | Not Available | Positive | 3360338 - 3360892 | 21764.4 |
| 50s ribosomal protein l19 | DN752_RS13090 | Not Available | Negative | 3361953 - 3362318 | 13981.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DN752_RS13095 | Not Available | Negative | 3362398 - 3363105 | 26333.8 |
| ribosome maturation factor rimm | DN752_RS13100 | Not Available | Negative | 3363109 - 3363639 | 20050.9 |
| 30s ribosomal protein s16 | DN752_RS13105 | Not Available | Negative | 3363654 - 3364238 | 21347.1 |
| Trna-arg | Not Available | Not Available | Positive | 3364434 - 3364505 | Not Available |
| recombinase family protein | DN752_RS13115 | Not Available | Negative | 3364468 - 3366030 | 60583.4 |
| outer membrane beta-barrel family protein | DN752_RS25150 | Not Available | Positive | 3366239 - 3366946 | 27238.5 |
| outer membrane beta-barrel family protein | DN752_RS25155 | Not Available | Positive | 3366930 - 3367238 | 11735.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
