Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | DN752_RS13030 | Not Available | Negative | 3347983 - 3348744 | 27270.3 |
| regulatory protein recx | DN752_RS13035 | Not Available | Positive | 3348841 - 3349350 | 19772.7 |
| m14 family zinc carboxypeptidase | DN752_RS13040 | Not Available | Positive | 3349485 - 3351215 | 66333.1 |
| rida family protein | DN752_RS13045 | Not Available | Positive | 3351303 - 3351686 | 13629.1 |
| hypothetical protein | DN752_RS13050 | Not Available | Positive | 3351710 - 3352201 | 18659.0 |
| class ii fumarate hydratase | DN752_RS13055 | Not Available | Positive | 3352506 - 3353906 | 50546.7 |
| spor domain-containing protein | DN752_RS13060 | Not Available | Positive | 3354052 - 3354675 | 23622.3 |
| single-stranded-dna-specific exonuclease recj | DN752_RS13065 | Not Available | Positive | 3355110 - 3356879 | 66619.7 |
| lps export abc transporter atp-binding protein | DN752_RS13070 | Not Available | Positive | 3356882 - 3357613 | 27239.5 |
| gh3 auxin-responsive promoter family protein | DN752_RS13075 | Not Available | Positive | 3357618 - 3359141 | 57996.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
