Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator | DN752_RS12975 | Not Available | Negative | 3335620 - 3336090 | 18064.9 |
| aspartyl protease family protein | DN752_RS12980 | Not Available | Positive | 3336324 - 3337574 | 47449.7 |
| pas domain-containing sensor histidine kinase | DN752_RS12985 | Not Available | Positive | 3337691 - 3340975 | 125660.0 |
| lema family protein | DN752_RS12995 | Not Available | Positive | 3341184 - 3341774 | 22031.0 |
| tpm domain-containing protein | DN752_RS13000 | Not Available | Positive | 3341829 - 3342263 | 16014.2 |
| tpm domain-containing protein | DN752_RS13005 | Not Available | Positive | 3342244 - 3343071 | 29182.0 |
| trimeric intracellular cation channel family protein | DN752_RS13010 | Not Available | Negative | 3344621 - 3345232 | 22263.0 |
| class i sam-dependent methyltransferase | DN752_RS13015 | Not Available | Negative | 3345356 - 3345976 | 23220.6 |
| patatin-like phospholipase family protein | DN752_RS13020 | Not Available | Negative | 3345973 - 3346860 | 32597.4 |
| 50s ribosomal protein l11 methyltransferase | DN752_RS13025 | Not Available | Negative | 3347082 - 3347912 | 31334.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
