Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate export family protein | DN752_RS12875 | Not Available | Negative | 3310992 - 3312263 | 47235.2 |
| crp/fnr family transcriptional regulator | DN752_RS12880 | Not Available | Negative | 3312447 - 3313160 | 26618.2 |
| gnat family n-acetyltransferase | DN752_RS12885 | Not Available | Positive | 3313364 - 3313846 | 18617.2 |
| crp/fnr family transcriptional regulator | DN752_RS12890 | Not Available | Positive | 3314027 - 3314608 | 22496.1 |
| s9 family peptidase | DN752_RS12895 | Not Available | Negative | 3314689 - 3316941 | 84983.9 |
| tonb-dependent receptor family protein | DN752_RS12900 | Not Available | Negative | 3317300 - 3319558 | 84084.2 |
| acyltransferase family protein | DN752_RS12905 | Not Available | Negative | 3320126 - 3321235 | 40966.8 |
| m28 family peptidase | DN752_RS12910 | Not Available | Negative | 3321303 - 3322211 | 33939.3 |
| ntpase | DN752_RS12915 | Not Available | Positive | 3322403 - 3323395 | 36950.4 |
| aaa family atpase | DN752_RS12920 | Not Available | Negative | 3323481 - 3324011 | 20933.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
