Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp/nbp35 family atp-binding protein | DN752_RS01035 | Not Available | Positive | 279201 - 280295 | 39112.8 |
| nifu family protein | DN752_RS01040 | Not Available | Positive | 280304 - 280555 | 8926.82 |
| t9ss-dependent choice-of-anchor j family protein | DN752_RS01045 | Not Available | Positive | 280578 - 283628 | 111759.0 |
| isas1 family transposase | DN752_RS01050 | Not Available | Positive | 284398 - 285531 | 41824.4 |
| rna polymerase sigma factor | DN752_RS01055 | Not Available | Positive | 285759 - 286325 | 22497.0 |
| fecr family protein | DN752_RS01060 | Not Available | Positive | 286446 - 287570 | 41895.4 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS01065 | Not Available | Positive | 287733 - 291239 | 129775.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DN752_RS01070 | Not Available | Positive | 291251 - 292825 | 58667.5 |
| purple acid phosphatase family protein | DN752_RS01075 | Not Available | Positive | 292899 - 294224 | 50616.9 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | DN752_RS01080 | Not Available | Positive | 294235 - 295830 | 59228.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
