Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | DN752_RS12775 | Not Available | Negative | 3288695 - 3289057 | 13651.2 |
| ykgj family cysteine cluster protein | DN752_RS12780 | Not Available | Negative | 3289134 - 3289727 | 22001.3 |
| tigr00730 family rossman fold protein | DN752_RS12785 | Not Available | Positive | 3290037 - 3290768 | 27653.3 |
| lytic transglycosylase domain-containing protein | DN752_RS12790 | Not Available | Positive | 3290772 - 3291722 | 36878.4 |
| hypothetical protein | DN752_RS12795 | Not Available | Positive | 3292126 - 3293805 | 63556.5 |
| tonb-dependent receptor | DN752_RS12800 | Not Available | Positive | 3293997 - 3296836 | 103590.0 |
| sensor histidine kinase | DN752_RS12805 | Not Available | Positive | 3297058 - 3298110 | 40801.0 |
| lytr/algr family response regulator transcription factor | DN752_RS12810 | Not Available | Positive | 3298129 - 3298872 | 28277.0 |
| lytr/algr family response regulator transcription factor | DN752_RS12815 | Not Available | Positive | 3299027 - 3299779 | 28392.0 |
| aaa family atpase | DN752_RS12820 | Not Available | Positive | 3299927 - 3301228 | 47728.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
