Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DN752_RS12730 | Not Available | Negative | 3278552 - 3279190 | 24539.9 |
| hypothetical protein | DN752_RS12735 | Not Available | Negative | 3279203 - 3279640 | 16072.5 |
| excinuclease abc subunit uvrb | DN752_RS12740 | Not Available | Negative | 3279637 - 3281676 | 77551.5 |
| duf4105 domain-containing protein | DN752_RS12745 | Not Available | Negative | 3281729 - 3282913 | 45829.7 |
| t9ss type a sorting domain-containing protein | DN752_RS12750 | Not Available | Positive | 3283063 - 3285264 | 80054.1 |
| acyl-coa dehydrogenase | DN752_RS12755 | Not Available | Positive | 3285381 - 3286520 | 41385.7 |
| arac family transcriptional regulator | DN752_RS12760 | Not Available | Positive | 3286660 - 3287589 | 35808.3 |
| geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase | DN752_RS25250 | Not Available | Negative | 3287572 - 3287790 | 7420.92 |
| geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase | DN752_RS12765 | Not Available | Negative | 3287769 - 3288356 | 21093.7 |
| hypothetical protein | DN752_RS12770 | Not Available | Negative | 3288337 - 3288702 | 13075.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
