Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | DN752_RS12580 | Not Available | Positive | 3237360 - 3241859 | 166443.0 |
| glutamate synthase subunit beta | DN752_RS12585 | Not Available | Positive | 3241861 - 3243342 | 54763.1 |
| sulfatase | DN752_RS12590 | Not Available | Negative | 3243726 - 3245153 | 54005.4 |
| voc family protein | DN752_RS12595 | Not Available | Negative | 3245312 - 3245749 | 16127.9 |
| nitroreductase | DN752_RS12600 | Not Available | Positive | 3245994 - 3246599 | 23053.5 |
| duf6952 family protein | DN752_RS12605 | Not Available | Negative | 3246699 - 3246956 | 9910.09 |
| thioredoxin family protein | DN752_RS12610 | Not Available | Negative | 3246937 - 3247251 | 11823.1 |
| inosine/xanthosine triphosphatase | DN752_RS12615 | Not Available | Negative | 3247348 - 3247932 | 21774.8 |
| yebc/pmpr family dna-binding transcriptional regulator | DN752_RS12620 | Not Available | Negative | 3247993 - 3248700 | 26837.4 |
| nad(p)/fad-dependent oxidoreductase | DN752_RS12625 | Not Available | Positive | 3249393 - 3250733 | 50135.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
