Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | DN752_RS12530 | Not Available | Negative | 3226344 - 3226790 | 17604.8 |
| duf4286 family protein | DN752_RS12535 | Not Available | Positive | 3227171 - 3227473 | 12261.5 |
| gnat family n-acetyltransferase | DN752_RS12540 | Not Available | Negative | 3227657 - 3228133 | 18628.3 |
| type iii pantothenate kinase | DN752_RS12545 | Not Available | Positive | 3228352 - 3229122 | 28125.0 |
| rne/rng family ribonuclease | DN752_RS12550 | Not Available | Negative | 3229512 - 3231083 | 59335.2 |
| tetratricopeptide repeat protein | DN752_RS12555 | Not Available | Negative | 3231267 - 3232085 | 30511.2 |
| hu family dna-binding protein | DN752_RS12560 | Not Available | Negative | 3232107 - 3232415 | 11571.1 |
| a/g-specific adenine glycosylase | DN752_RS12565 | Not Available | Positive | 3232574 - 3233647 | 41293.4 |
| single-stranded dna-binding protein | DN752_RS12570 | Not Available | Positive | 3233764 - 3234237 | 16851.5 |
| gliding motility-associated protein glde | DN752_RS12575 | Not Available | Positive | 3234305 - 3235654 | 50490.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
