Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS12480 | Not Available | Positive | 3212447 - 3213184 | 28487.2 |
| peptide-methionine (r)-s-oxide reductase msrb | DN752_RS12485 | Not Available | Positive | 3213457 - 3213900 | 16447.4 |
| peptide-methionine (s)-s-oxide reductase | DN752_RS12490 | Not Available | Positive | 3213929 - 3214432 | 19276.9 |
| tetr/acrr family transcriptional regulator | DN752_RS12495 | Not Available | Negative | 3214711 - 3215361 | 25382.6 |
| sulfatase-like hydrolase/transferase | DN752_RS12500 | Not Available | Negative | 3216403 - 3217707 | 49311.4 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS12505 | Not Available | Negative | 3217786 - 3219519 | 65055.4 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS12510 | Not Available | Negative | 3219539 - 3223096 | 131209.0 |
| fecr family protein | DN752_RS12515 | Not Available | Negative | 3223296 - 3224402 | 42227.9 |
| rna polymerase sigma factor | DN752_RS12520 | Not Available | Negative | 3224591 - 3225199 | 23520.5 |
| merr family transcriptional regulator | DN752_RS12525 | Not Available | Negative | 3225448 - 3226347 | 34326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
