Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DN752_RS12380 | Not Available | Positive | 3185914 - 3187164 | 47248.2 |
| duf4221 family protein | DN752_RS12385 | Not Available | Negative | 3187665 - 3188768 | 41615.9 |
| l-glutamate gamma-semialdehyde dehydrogenase | DN752_RS12390 | Not Available | Negative | 3189086 - 3190717 | 60244.4 |
| yjjg family noncanonical pyrimidine nucleotidase | DN752_RS12395 | Not Available | Negative | 3190803 - 3191498 | 27018.9 |
| arsr/smtb family transcription factor | DN752_RS12400 | Not Available | Negative | 3191514 - 3191894 | 15096.4 |
| carboxypeptidase-like regulatory domain-containing protein | DN752_RS12405 | Not Available | Positive | 3192029 - 3192676 | 24177.0 |
| dihydrodipicolinate synthase family protein | DN752_RS12410 | Not Available | Positive | 3193259 - 3194185 | 33788.2 |
| sodium:solute symporter | DN752_RS12415 | Not Available | Positive | 3194226 - 3195719 | 54737.9 |
| hypothetical protein | DN752_RS12420 | Not Available | Positive | 3195747 - 3197462 | 63244.5 |
| duf4403 family protein | DN752_RS12425 | Not Available | Positive | 3197956 - 3199341 | 52421.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
