Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | DN752_RS12215 | Not Available | Positive | 3146995 - 3148227 | 45342.7 |
| hypothetical protein | DN752_RS12225 | Not Available | Negative | 3148823 - 3149221 | 14484.2 |
| gnat family n-acetyltransferase | DN752_RS12230 | Not Available | Positive | 3149518 - 3150120 | 22734.4 |
| hypothetical protein | DN752_RS12235 | Not Available | Positive | 3150194 - 3150775 | 21714.0 |
| iron-containing alcohol dehydrogenase | DN752_RS12240 | Not Available | Positive | 3151456 - 3152616 | 42232.5 |
| ethanolamine ammonia-lyase subunit eutb | DN752_RS12245 | Not Available | Positive | 3153096 - 3155411 | 85781.5 |
| m1 family metallopeptidase | DN752_RS12250 | Not Available | Negative | 3155525 - 3157186 | 64001.4 |
| catalase/peroxidase hpi | DN752_RS12255 | Not Available | Negative | 3157588 - 3159822 | 82477.9 |
| dipeptidase | DN752_RS12260 | Not Available | Positive | 3161071 - 3162459 | 51028.9 |
| protein-disulfide reductase dsbd family protein | DN752_RS12265 | Not Available | Positive | 3162611 - 3164749 | 79389.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
