Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | DN752_RS12065 | Not Available | Positive | 3099827 - 3100597 | 29491.4 |
| hypothetical protein | DN752_RS24485 | Not Available | Positive | 3101235 - 3101516 | 10650.8 |
| abc transporter atp-binding protein | DN752_RS12075 | Not Available | Negative | 3101750 - 3103537 | 65760.5 |
| duf6787 family protein | DN752_RS12080 | Not Available | Negative | 3103661 - 3103984 | 12640.1 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS12085 | Not Available | Negative | 3104373 - 3106370 | 76407.3 |
| tonb-dependent receptor | DN752_RS12090 | Not Available | Negative | 3106402 - 3109911 | 129742.0 |
| fecr family protein | DN752_RS12095 | Not Available | Negative | 3110030 - 3111100 | 40435.6 |
| rna polymerase sigma factor | DN752_RS12100 | Not Available | Negative | 3111254 - 3111826 | 22634.3 |
| pectate lyase | DN752_RS12105 | Not Available | Negative | 3112485 - 3113570 | 40864.6 |
| glycoside hydrolase family 28 protein | DN752_RS12110 | Not Available | Negative | 3113567 - 3115183 | 59951.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
