Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS11920 | Not Available | Negative | 3065802 - 3066275 | 18111.8 |
| zip family metal transporter | DN752_RS11925 | Not Available | Positive | 3066497 - 3067210 | 25484.1 |
| pentapeptide repeat-containing protein | DN752_RS11930 | Not Available | Positive | 3067237 - 3067806 | 21825.8 |
| atp-dependent dna helicase recg | DN752_RS11935 | Not Available | Negative | 3069133 - 3071226 | 79531.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | DN752_RS11940 | Not Available | Negative | 3071314 - 3072501 | 45127.0 |
| alpha-l-fucosidase | DN752_RS11945 | Not Available | Positive | 3074069 - 3076123 | 76101.8 |
| peptidoglycan dd-metalloendopeptidase family protein | DN752_RS11950 | Not Available | Negative | 3076336 - 3077022 | 25879.6 |
| pyridoxal-phosphate dependent enzyme | DN752_RS11955 | Not Available | Positive | 3077080 - 3078039 | 34552.9 |
| hypothetical protein | DN752_RS11960 | Not Available | Positive | 3078496 - 3078756 | 9708.2 |
| serine hydroxymethyltransferase | DN752_RS11965 | Not Available | Positive | 3079523 - 3080791 | 46674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
