Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3014798 - 3014881 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3014979 - 3015051 | Not Available |
| dna mismatch repair protein muts | DN752_RS11680 | Not Available | Negative | 3015203 - 3017812 | 98372.9 |
| rna methyltransferase | DN752_RS11685 | Not Available | Positive | 3017902 - 3018450 | 20412.5 |
| hydrogen peroxide-inducible genes activator | DN752_RS11690 | Not Available | Negative | 3018713 - 3019645 | 35863.6 |
| pyridoxal phosphate-dependent decarboxylase family protein | DN752_RS11695 | Not Available | Negative | 3020806 - 3022236 | 54021.6 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS11700 | Not Available | Negative | 3022426 - 3023184 | 27314.4 |
| hypothetical protein | DN752_RS11705 | Not Available | Negative | 3023212 - 3023841 | 23846.7 |
| hypothetical protein | DN752_RS11710 | Not Available | Negative | 3023962 - 3024462 | 18888.5 |
| voc family protein | DN752_RS11715 | Not Available | Negative | 3024584 - 3024955 | 13632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
