Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | DN752_RS11620 | Not Available | Negative | 2999222 - 2999893 | 26638.4 |
| yfit family bacillithiol transferase | DN752_RS11625 | Not Available | Negative | 3000506 - 3001051 | 21393.3 |
| phospholipase d-like domain-containing protein | DN752_RS11630 | Not Available | Negative | 3001286 - 3001972 | 26357.2 |
| very short patch repair endonuclease | DN752_RS11635 | Not Available | Positive | 3002243 - 3002704 | 18667.8 |
| duf2357 domain-containing protein | DN752_RS11640 | Not Available | Negative | 3002721 - 3005003 | 87576.5 |
| mcrb family protein | DN752_RS11645 | Not Available | Negative | 3005007 - 3006587 | 60222.2 |
| had family hydrolase | DN752_RS11650 | Not Available | Positive | 3006750 - 3007406 | 24638.2 |
| secondary thiamine-phosphate synthase enzyme yjbq | DN752_RS11655 | Not Available | Negative | 3007487 - 3007909 | 15597.7 |
| dna repair protein rada | DN752_RS11660 | Not Available | Negative | 3008709 - 3010085 | 50361.7 |
| dna polymerase i | DN752_RS11665 | Not Available | Negative | 3010261 - 3013077 | 105957.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
