Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | DN752_RS11475 | Not Available | Negative | 2966013 - 2966411 | 14975.0 |
| srpbcc domain-containing protein | DN752_RS11480 | Not Available | Negative | 2966595 - 2967059 | 17877.4 |
| arsr/smtb family transcription factor | DN752_RS11485 | Not Available | Negative | 2967114 - 2967446 | 12824.4 |
| m14 metallopeptidase family protein | DN752_RS11490 | Not Available | Negative | 2968218 - 2969714 | 56280.1 |
| dipeptide epimerase | DN752_RS11495 | Not Available | Positive | 2970132 - 2971142 | 37833.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DN752_RS11500 | Not Available | Positive | 2971225 - 2972286 | 39041.6 |
| hypothetical protein | DN752_RS11505 | Not Available | Negative | 2972319 - 2972852 | 20151.8 |
| gmc oxidoreductase | DN752_RS11510 | Not Available | Negative | 2973122 - 2974822 | 63814.1 |
| gluconate 2-dehydrogenase subunit 3 family protein | DN752_RS11515 | Not Available | Negative | 2974815 - 2975378 | 20843.1 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | DN752_RS11520 | Not Available | Negative | 2976028 - 2977590 | 59107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
