Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | DN752_RS11425 | Not Available | Negative | 2950798 - 2951937 | 42057.0 |
| lmo0937 family membrane protein | DN752_RS11430 | Not Available | Negative | 2952729 - 2952881 | 5386.12 |
| muts-related protein | DN752_RS11435 | Not Available | Negative | 2952966 - 2954723 | 67696.8 |
| bama/tama family outer membrane protein | DN752_RS11440 | Not Available | Positive | 2954787 - 2955953 | 44077.3 |
| arylsulfatase | DN752_RS11445 | Not Available | Negative | 2956659 - 2958434 | 66765.9 |
| cytochrome c nitrite reductase small subunit | DN752_RS11450 | Not Available | Positive | 2959582 - 2960232 | 24947.9 |
| ammonia-forming cytochrome c nitrite reductase | DN752_RS11455 | Not Available | Positive | 2960237 - 2961730 | 56427.1 |
| cytochrome c biogenesis protein | DN752_RS11460 | Not Available | Positive | 2961839 - 2964913 | 117135.0 |
| ydei/ompd-associated family protein | DN752_RS11465 | Not Available | Negative | 2965043 - 2965639 | 22656.3 |
| iron chaperone | DN752_RS11470 | Not Available | Negative | 2965651 - 2966001 | 13134.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
