Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS11370 | Not Available | Negative | 2940160 - 2941686 | 55026.1 |
| nad(p)h-dependent oxidoreductase | DN752_RS11375 | Not Available | Negative | 2942333 - 2942980 | 24342.2 |
| winged helix-turn-helix transcriptional regulator | DN752_RS11380 | Not Available | Positive | 2943096 - 2943464 | 13978.1 |
| peroxiredoxin-like family protein | DN752_RS11385 | Not Available | Negative | 2943727 - 2944341 | 22720.5 |
| sensor histidine kinase | DN752_RS11390 | Not Available | Negative | 2944514 - 2945821 | 49331.0 |
| ion channel | DN752_RS11400 | Not Available | Negative | 2946814 - 2947509 | 26529.2 |
| helix-turn-helix transcriptional regulator | DN752_RS11405 | Not Available | Negative | 2947628 - 2948425 | 31026.4 |
| arsr/smtb family transcription factor | DN752_RS11410 | Not Available | Negative | 2948627 - 2948932 | 11577.2 |
| hypothetical protein | DN752_RS11415 | Not Available | Negative | 2949714 - 2950142 | 15890.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DN752_RS11420 | Not Available | Negative | 2950279 - 2950794 | 18119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
