Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | DN752_RS11270 | Not Available | Negative | 2920550 - 2921071 | 19583.0 |
| rod shape-determining protein mrec | DN752_RS11275 | Not Available | Negative | 2921064 - 2921897 | 30823.6 |
| rod shape-determining protein | DN752_RS11280 | Not Available | Negative | 2921905 - 2922933 | 37288.6 |
| rep-associated tyrosine transposase | DN752_RS11285 | Not Available | Negative | 2923346 - 2923873 | 20539.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DN752_RS11290 | Not Available | Negative | 2924154 - 2925680 | 55650.1 |
| phosphoribosylglycinamide formyltransferase | DN752_RS11295 | Not Available | Negative | 2925752 - 2926309 | 20889.3 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | DN752_RS11300 | Not Available | Negative | 2926492 - 2927367 | 32740.3 |
| fic family protein | DN752_RS11305 | Not Available | Negative | 2927814 - 2928956 | 43098.8 |
| hypothetical protein | DN752_RS25340 | Not Available | Negative | 2929226 - 2929399 | 6603.07 |
| fic/doc family n-terminal domain-containing protein | DN752_RS11310 | Not Available | Negative | 2929362 - 2929562 | 7426.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
