Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DN752_RS11175 | Not Available | Positive | 2896174 - 2897472 | 49627.0 |
| lipoprotein signal peptidase | DN752_RS11180 | Not Available | Negative | 2898206 - 2898844 | 24224.8 |
| isoleucine--trna ligase | DN752_RS11185 | Not Available | Negative | 2898889 - 2902275 | 129083.0 |
| tigr00730 family rossman fold protein | DN752_RS11190 | Not Available | Positive | 2902592 - 2903161 | 21081.9 |
| phosphatase | DN752_RS11195 | Not Available | Positive | 2903340 - 2904788 | 52880.0 |
| cytochrome-c peroxidase | DN752_RS11200 | Not Available | Positive | 2904793 - 2906628 | 69225.7 |
| hypothetical protein | DN752_RS24475 | Not Available | Positive | 2907075 - 2907224 | 5533.64 |
| gaf domain-containing protein | DN752_RS11205 | Not Available | Negative | 2907230 - 2907712 | 17469.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DN752_RS11210 | Not Available | Negative | 2907738 - 2908766 | 38778.7 |
| duf4382 domain-containing protein | DN752_RS11215 | Not Available | Negative | 2908781 - 2909593 | 29899.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
