Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DN752_RS11025 | Not Available | Negative | 2860640 - 2863807 | 116409.0 |
| radical sam/spasm domain-containing protein | DN752_RS11030 | Not Available | Negative | 2864213 - 2865232 | 39084.8 |
| hisa/hisf-related tim barrel protein | DN752_RS11035 | Not Available | Negative | 2865731 - 2866477 | 27808.4 |
| ycf48-related protein | DN752_RS11040 | Not Available | Negative | 2866624 - 2867670 | 37433.4 |
| excinuclease abc subunit uvra | DN752_RS11045 | Not Available | Negative | 2867823 - 2870639 | 104615.0 |
| simpl domain-containing protein | DN752_RS11050 | Not Available | Negative | 2870719 - 2871354 | 23333.0 |
| rna polymerase sigma factor | DN752_RS11055 | Not Available | Positive | 2871759 - 2872361 | 23579.6 |
| hypothetical protein | DN752_RS11060 | Not Available | Positive | 2872336 - 2872572 | 9169.98 |
| tonb-dependent receptor | DN752_RS11070 | Not Available | Positive | 2873207 - 2875594 | 89715.9 |
| acr3 family arsenite efflux transporter | DN752_RS11075 | Not Available | Negative | 2875690 - 2876733 | 38277.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
