Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zip family metal transporter | DN752_RS10585 | Not Available | Negative | 2734457 - 2735188 | 26672.4 |
| fad:protein fmn transferase | DN752_RS10590 | Not Available | Negative | 2735191 - 2736255 | 39438.7 |
| holliday junction branch migration dna helicase ruvb | DN752_RS10595 | Not Available | Positive | 2736669 - 2737706 | 38316.8 |
| trna epoxyqueuosine(34) reductase queg | DN752_RS10600 | Not Available | Positive | 2737763 - 2738704 | 36003.9 |
| hypothetical protein | DN752_RS24465 | Not Available | Negative | 2738882 - 2739163 | 10681.8 |
| hypothetical protein | DN752_RS10605 | Not Available | Negative | 2739234 - 2739584 | 13138.6 |
| rossmann-like and duf2520 domain-containing protein | DN752_RS10610 | Not Available | Negative | 2739710 - 2740489 | 28818.6 |
| cytochrome c biogenesis protein ccsa | DN752_RS10615 | Not Available | Negative | 2740760 - 2743288 | 95589.5 |
| cytochrome c maturation protein ccme | DN752_RS10620 | Not Available | Negative | 2743330 - 2743755 | 15459.3 |
| ccmd family protein | DN752_RS10625 | Not Available | Negative | 2743839 - 2744081 | 9249.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
