Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | DN752_RS10535 | Not Available | Negative | 2723450 - 2724550 | 40279.5 |
| hypothetical protein | DN752_RS10540 | Not Available | Positive | 2724814 - 2725482 | 24295.6 |
| capsule assembly wzi family protein | DN752_RS10545 | Not Available | Positive | 2725507 - 2727198 | 64735.3 |
| bama/tama family outer membrane protein | DN752_RS10550 | Not Available | Negative | 2727217 - 2728395 | 44974.6 |
| fatty acid desaturase | DN752_RS10555 | Not Available | Negative | 2728475 - 2729167 | 27172.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DN752_RS10560 | Not Available | Negative | 2729404 - 2730249 | 31793.0 |
| lycopene cyclase domain-containing protein | DN752_RS10565 | Not Available | Negative | 2730256 - 2730963 | 27600.1 |
| phytoene/squalene synthase family protein | DN752_RS10570 | Not Available | Negative | 2730972 - 2731814 | 32356.2 |
| phytoene desaturase family protein | DN752_RS10575 | Not Available | Negative | 2731818 - 2733314 | 55906.9 |
| rna polymerase sigma factor | DN752_RS10580 | Not Available | Negative | 2733316 - 2733825 | 19819.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
